List of Tables

1. Summary of Experimental Design Codes
2. Subroutines from Numerical Recipes in C
3. Contact for Help
4. Command Line Options for all programs
5. Standard Filename Extensions and File types for Output Files
6. Miscellaneous Files and File types
7. Command Line Options for Rmap
8. Command Line Options for Rmap
9. Command Line Options for Rqtl
10. Command Line Options for Rcross
11. Command Line Options for Prune
12. Command Line Options for Qstats
13. Command Line Options for LRmapqtl
14. Command Line Options for SRmapqtl
15. Command Line Options for Zmapqtl
16. Examples of Interim Files for Model 6
17. Command Line Options for JZmapqtl
18. Coded variables
19. Command Line Options for MImapqtl
20. Command Line Options for Eqtl
21. Output for different -H values with Eqtl
22. Command Line Options for Preplot
23. Filename extensions for Preplot output
24. Timings for Interval Mapping
25. Timings for Composite Interval Mapping
26. Timings for Multiple Interval Mapping