Model 9

This is a new option that doesn't do any analysis: It merely prepares an input file for the MultiRegress module. JZmapqtl will walk down the genome, and for each site will calculate the expected value of a QTL genotype. The output file will contain these expected genotypes and the trait values. MultiRegress can then be used to estimate QTL positions and additive and dominance effects. See the manual page for MultiRegress for more information.