MImapqtl uses multiple interval mapping to map quantitative trait loci to
a map of molecular markers. It requires a molecular map that could be a
random one produced by
Rmap, or a real one in the same format as the output of
Rmap. The sample could be a randomly generated one from
Rcross or a real one in the same format as the output of
Rcross. In addition, the program can use an initial genetic model.
This model will most likely be produced by running Eqtl on the results
of a Zmapqtl run, but could be the results of a prior run of MImapqtl.