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running_x_applications
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running_x_applications [2021/01/28 12:18] root |
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| ====== Running X Applications ====== | ====== Running X Applications ====== | ||
| - | You can run an X Windows application on the head node e.g. igv. | + | You can run an X Windows application on the head node e.g. igv and fastqc. |
| * Run an X Server on your client machine (e.g. XMing or MobaXTerm on Windows). | * Run an X Server on your client machine (e.g. XMing or MobaXTerm on Windows). | ||
| * Make sure "X Forwarding" | * Make sure "X Forwarding" | ||
| Line 7: | Line 7: | ||
| * Option in putty (Connection / SSH / X11). | * Option in putty (Connection / SSH / X11). | ||
| * Can be quite slow depending on the application and the network connection. | * Can be quite slow depending on the application and the network connection. | ||
| - | |||
| - | IGV needs an older version of java. We set the path accordingly before running the program. | ||
| - | |||
| - | < | ||
| - | export PATH=/ | ||
| - | igv | ||
| - | </ | ||
| Get a GUI view of the cluster jobs, nodes, etc. | Get a GUI view of the cluster jobs, nodes, etc. | ||
running_x_applications.1611854301.txt.gz ยท Last modified: 2021/01/28 12:18 by root
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