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running_x_applications

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Running X Applications

You can run an X Windows application on the head node e.g. igv.

  • Run an X Server on your client machine (e.g. XMing or MobaXTerm on Windows).
  • Make sure “X Forwarding” is enabled.
    • -X on ssh.
    • Option in putty (Connection / SSH / X11).
  • Can be quite slow depending on the application and the network connection.

IGV needs an older version of java. We set the path accordingly before running the program.

export PATH=/usr/lib/jvm/java-8-oracle/jre/bin:$PATH
igv

Get a GUI view of the cluster jobs, nodes, etc.

sview
running_x_applications.1611854301.txt.gz · Last modified: 2021/01/28 12:18 by root