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submitting_many_jobs
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submitting_many_jobs [2021/01/28 11:51] root |
submitting_many_jobs [2021/02/20 09:51] (current) root |
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| < | < | ||
| - | sbatch -n 2 run_multi_job_o | + | sbatch -n 2 run_multi_job_%t |
| </ | </ | ||
| Line 50: | Line 50: | ||
| Some other options for limiting the number of cores your jobs use are described below. | Some other options for limiting the number of cores your jobs use are described below. | ||
| + | |||
| + | ==== Singleton Jobs ==== | ||
| + | |||
| + | You can use the **--dependency** option of sbatch to make slurm run just one of your jobs at a time. Suppose you submit 10 jobs with the same job name, using the **--dependency=singleton** option will make slurm run these jobs one at a time. | ||
| + | |||
| + | < | ||
| + | for i in $(seq 1 10); do | ||
| + | sbatch --job-name oneatatime --dependency=singleton my_script.bash file_${i}.fasta | ||
| + | done | ||
| + | </ | ||
| ==== Sending a Job to a Specific Node ==== | ==== Sending a Job to a Specific Node ==== | ||
submitting_many_jobs.1611852699.txt.gz ยท Last modified: 2021/01/28 11:51 by root
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