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running_jupyterlab [2020/02/27 13:41]
ajgreen4
running_jupyterlab [2020/02/27 13:47] (current)
ajgreen4
Line 7: Line 7:
 JupyterLab web page: https://jupyter.org/ JupyterLab web page: https://jupyter.org/
  
-Once you have created a Singularity container with JupyterLab installed the following code can be run on the head node of the Cluster. You will need to tunnel into your JupyterLab instance therefore I recommend that Windows users installing MobaXterm (https://mobaxterm.mobatek.net/). Follow the tunneling instructions for either MacOS / linux or Windows. Note that your Singularity container will run on node91 but this can be changed to any of the Cluster nodes.+Once you have created a Singularity container with JupyterLab installed the following code can be run on the head node of the Cluster. You will need to tunnel into your JupyterLab instance therefore I recommend that Windows users installing MobaXterm (https://mobaxterm.mobatek.net/). Follow the tunneling instructions for either MacOS / linux or Windows.  
 + 
 +Note that your Singularity container will run on node91 but this can be changed to any of the Cluster nodes but you will need to change -p (i.e. standard) and -w (i.e. node10) arguments.
  
 Once finished shutdown JupyterLab and exit your job to free up used resources. Once finished shutdown JupyterLab and exit your job to free up used resources.
  
 <code> <code>
-#Running jupyter in singularity container on Captain Kirk+#Running jupyter in a Singularity container on captainkirk
  
 srun -p gpu -w node91 -J jupGAN -c 1 --pty --mem=4000 bash srun -p gpu -w node91 -J jupGAN -c 1 --pty --mem=4000 bash
running_jupyterlab.1582828878.txt.gz · Last modified: 2020/02/27 13:41 by ajgreen4